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16s_Teleo_Reference_Database.fasta (104.45 kB)

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Cichlid_CR_Reference_Database.fasta (82.42 kB)

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12S-V5_Reference_Database.fasta (44.6 kB)

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MiFish_Reference_Database.fasta (66.14 kB)

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Lake Tanganyika eDNA Metabarcoding Study: Reference Databases

dataset

posted on 2019-10-02, 15:49 authored by Chris Doble, Julia DayJulia Day, David MurrellDavid Murrell, Helen HippersonHelen Hipperson, Gavin HorsburghGavin Horsburgh, Walter Salzburger, Chacha Mwita

Four reference databases for each of the primer sets used in: Doble C. J, Hipperson H, Salzburger W, Horsburgh G, Mwita C, Murrell D. J and Day J. J. (Accepted) Testing the performance of environmental DNA metabarcoding for surveying highly diverse tropical fish communities: A case study from Lake Tanganyika. Environmental DNA

Four primers were used: 1. 12S-V5; 2. MiFish-U; 3. 16s_Teleo; 4. Cichlid_CR. Reference databases for each of these primer sets contain fish species found within the Lake Tanganyika basin. For further information on specific species included within the reference databases see paper.