Scilab_code_19-09071B.sce (13.01 kB)
Demo Scilab code for AMPAR kinetic model
softwareposted on 09.07.2019, 15:19 authored by Ian Coombs, David Soto, Thomas McGeeThomas McGee, Matthew GoldMatthew Gold, Mark FarrantMark Farrant, Stuart Cull-CandyStuart Cull-Candy
"Homomeric Q/R edited AMPA receptors conduct when desensitized"
Coombs, Soto, McGee, Gold, Farrant, Cull-Candy
The code associated with the above manuscript:
is designed to be executed in SciNotes within Scilab.
It contains the (i) pooled, parsed experimental current and noise data, (ii) kinetic scheme, (iii) rates, and (iv) Q-matrix calculations required to mimic this data.
The code was created in Scilab 5.5.0 (64 bit for Windows), but should run on any version of Scilab on any platform (Windows, Linux or Mac OS X).
Scilab is open source and can be downloaded and installed from www.scilab.org. Installation is quick.
Demo/Instructions for use.
Pressing 'play' within SciNotes will execute the code to calculate occupancies, current and noise. The code outputs the calculated data (red) along with raw data (black). The effect of manually altering rates and conductances can be observed by changing lines 16-30 as the user wishes.
The code itself should run in less than 1 s.
I confirm that I am not uploading any: personal data as defined by data protection legislation, including information that may identify a living individual; information provided in confidence; or information that would contravene a third-party agreement
I have considered whether the data to be published may be licensed commercially before deciding to freely release it to the public. Further information and advice may be sought from UCL Business https://www.uclb.com/about/our-people/